Level I One-Day Workshop Syllabus
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Prerequisites
Required:
The ability to understand terminology specific to computer usage ("left-click","minimize"), and feel comfortable navigating interfaces of common software applications such as Microsoft Office.
Recommended:
Read the Tutorial in GeneSpring (Help menu > Tutorial) to become familiar with the interface. Begin exploring features using sample data that comes with GeneSpring.
Syllabus
8:30AM |
Welcome and Refreshments |
Early morning |
Introduction to Gene Expression Analysis
- User interface & terminology
- Importing genomes and expression data
- Genome annotation and ontologies
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Break |
Late morning |
Setting Up Experiments
- 1- and 2-color data normalization
- Creating Experiments
- Interpretations and Parameters
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12:00PM |
Lunch |
Early afternoon |
Performing Quality Control
- Quality control on samples
- Quality control on genes
Fold Change Analysis
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Break |
Late afternoon |
Working with Gene Lists
- Venn diagrams
- Gene List Editor
- Filter on Gene List Numbers
Exporting Data
- Export GeneSpring data files
- Export data to Excel®
- Export graphics
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4:30PM |
Class Ends |
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